6WIYH

Crystal structure of fab 54-1g05
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
227
structure length
227
Chain Sequence
QVQLQQSGPRLVKPSQTLSLTCAISGDSVSSSSAVWTWIRQSPSRGLEWLGRTYYRSKWYDDYAVSVQGRITINPDTSKNQISLQLNSVTPDDTAVYYCARSSINIFGVFVMAMDVWGQGTAVTVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Fab 54-1G05 heavy chain
publication title Convergent Evolution in Breadth of Two VH6-1-Encoded Influenza Antibody Clonotypes from a Single Donor.
pubmed doi rcsb
source organism Homo sapiens
total genus 45
structure length 227
sequence length 227
ec nomenclature
pdb deposition date 2020-04-11
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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