6WRSP

Structure of the 50s subunit of the ribosome from methicillin resistant staphylococcus aureus in complex with the antibiotic, tedizolid
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
44
structure length
44
Chain Sequence
VKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLSA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title CryoEM survey of oxazolodinone antibiotics in complex with the 50S subunit of the methicillin resistant Staphylococcus aureus ribosome
rcsb
molecule tags Ribosome
molecule keywords 50S ribosomal protein L19
total genus 6
structure length 44
sequence length 44
ec nomenclature
pdb deposition date 2020-04-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
P PF00468 Ribosomal_L34 Ribosomal protein L34
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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