The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
50
|
sequence length |
125
|
structure length |
125
|
Chain Sequence |
MGKVVFLSDDQEIIEEVSKKAEEEGYDIQTSNDKKEIIDRLKRRNIDMIIVKTEDKESISEIIKQVLDSGAKVLILSSDENIIESIRKQYPKVETRRAQDKEEVKDAVEEFLKEGGSLEHHHHHH
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
molecule tags |
De novo protein
|
molecule keywords |
DE NOVO DESIGNED OR386
|
publication title |
Role of backbone strain in de novo design of complex alpha/beta protein structures
Accurate de novo design of asymetric alpha/beta proteins with ten or more secondary structure elements requires consideration of backbone strain
Design principle proposed from designed larger alpha/beta-proteins not folded as designed: Consistency between local,
rcsb |
source organism |
Synthetic construct
|
total genus |
50
|
structure length |
125
|
sequence length |
125
|
ec nomenclature | |
pdb deposition date | 2020-06-12 |
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...