6XHY1r

Crystal structure of the thermus thermophilus 70s ribosome in complex with telithromycin, mrna, aminoacylated a- and p-site trnas, and deacylated e-site trna at 2.60a resolution
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
68
structure length
68
Chain Sequence
b'AKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVR'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 23S Ribosomal RNA
publication title Structure of Erm-modified 70S ribosome reveals the mechanism of macrolide resistance.
doi rcsb
source organism Escherichia coli
molecule tags Ribosome
total genus 17
structure length 68
sequence length 68
chains with identical sequence 2r
ec nomenclature
pdb deposition date 2020-06-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
1r PF01084 Ribosomal_S18 Ribosomal protein S18
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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