6XXVA

Crystal structure of a computationally designed immunogen s2_1.2 in complex with its elicited antibody c57
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
226
structure length
226
Chain Sequence
VQLVESGGGLAKPGGSLRLSCAASGFTFSPYWMYWVRQAPGKGLEWVSVINSGGGITYYTDSVKGRFTISRENAKNTLYLQMDSLRPEDTAVYYCVRDRTYYSGVYYTEDGLDSWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Antibody C57, Heavy Chain
publication title Crystal Structure of a computationally designed Immunogen S2_1.2 in complex with its elicited antibody C57
rcsb
source organism Homo sapiens
total genus 43
structure length 226
sequence length 226
chains with identical sequence D
ec nomenclature
pdb deposition date 2020-01-28
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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