6Y07A

Designing a granulopoietic protein by topological rescaffolding 1: sohair
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
154
structure length
154
Chain Sequence
MTSDYIIEQIQRKQEEARLKVEEMERKLEAVKEASKRGVSSDQLLNLILDLADIITTLIQIIEESNEAIKELIKNQKGPTSDYIIEQIQRDQEEARKKVEEAEERLERVKEASKRGVSSDQLLDLIRELAEIIEELIRIIRRSNEAIKELIKNQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags De novo protein
molecule keywords sohair
publication title Designing of novel granulopoietic proteins by topological rescaffolding
rcsb
source organism Synthetic construct
total genus 64
structure length 154
sequence length 154
ec nomenclature
pdb deposition date 2020-02-06
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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