6YK8A

Otu-like deubiquitinase from legionella -lpg2529
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
287
structure length
271
Chain Sequence
CLYYAYSISLMYYLRAKNNVKITEDIFNKLGLKEEDRARLRKLLSKDPAFTRDEIKTIIEPILGRATRDLAAEHTKVEFKSSPHDTPLFSSLHYAVEFGFKRSLQINESELTLLIDNDFSNPDYTEAEIYKVSGLLDALQEYILTRTPSVIEEFNRQWENKKQSLTEKEIQVHQATILDNILRKETIDFLLAENEKHLDEYREHLRREFVWGSEETLMVLHRAIQGERMVRNEPVYDHEIILHVHRNGASPGSPEMILNNEGNVHWTSIIP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell invasion
molecule keywords Uncharacterized protein
publication title Bacterial OTU deubiquitinases regulate substrate ubiquitination upon Legionella infection.
pubmed doi rcsb
source organism Legionella pneumophila subsp. pneumophila (strain philadelphia 1 / atcc 33152 /
total genus 103
structure length 271
sequence length 287
chains with identical sequence B
ec nomenclature
pdb deposition date 2020-04-05
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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