6YNZt

Cryo-em structure of tetrahymena thermophila mitochondrial atp synthase - f1fo composite tetramer model
Total Genus 100
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
100
sequence length
365
structure length
365
Chain Sequence
SRIINHLRGDPVYQDNTKDVSLRGTFLRGKYDDLPTMIFFTEACDLTANWIPFFTNPQYDILAHRNVWLLNPRNFGNSDRHPSFDLQEMSDDVMRFMYSQKISMATLGGHGIGGKIALAVGCYHAERVTGVFSIDSSPMDQRYHEAFKEFKGYVNALTEINFKTWSDKDVKVFLKENIKDPKWRSIFTNNISKNAKTQSDSFNFEINYLNHNLNFNKADSLGNWAVKNGIYTGRAHFIFPEYSRWVHLATNTLPMHKVCARVKGFGHDIFYVQGDENPLNHWVYDFENYANVVASKLNKFLHSYDGVHALLKDRTEIGNFMIPDRIKSRNDSKHIYGDYSPAHLHHNWRFNHIYEKHDELDKKLN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords Ymf66
publication title Type III ATP synthase is pseudo-symmetric and oligomerizes through luminal linkers
rcsb
total genus 100
structure length 365
sequence length 365
chains with identical sequence t3
ec nomenclature
pdb deposition date 2020-04-14
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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