6YWSP

The structure of the large subunit of the mitoribosome from neurospora crassa
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
180
structure length
180
Chain Sequence
RNAPFRVGKKQIFLPNHVITFVRPLPKQPPNLATFIVPLEFNKLDLRDYLYHVYNVEVTGVRSFVNQRMHEQRHGDVGNWRRPKSQKMMIAELAKPFVWPKPPAEDAREAFDYAMWKKQKTAQEQDTKFQGIRAQGEVVPPSQFEVTKDRKAIKARQSKFLSGEETWAPGKVNAFLNSKI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Translation
molecule keywords RNA (2820-MER)
publication title Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
pubmed doi rcsb
total genus 35
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2020-04-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
P PF00276 Ribosomal_L23 Ribosomal protein L23
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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