6Z1PAR

Structure of the mitochondrial ribosome from tetrahymena thermophila
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
274
structure length
274
Chain Sequence
YIHKTSYNLEQFKSYTQNVEKALKDLNQEKEKLENSSPFDLLPRRKRRVYDRPLHDLDISNYECWRSYDKMIFKTHKHAARVVCKINLSPRALKHAFGIGSDVSRNSDVSTREYDFEDSNLDSFLLYDYKATTEYHGNNDPNYDYQNQDQVPPKKRKQQHPTPQEFWESDEPHAFRVNCSNYADYHKFKKWIQTEIEKRASEKSYEEKIIERFGPYKIYDQYDQKYDLVKEPSVFKYGREYYLEKGKKFSEKEMEENPYLKPIKPAKQMEDKYR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ribosome
molecule keywords LSU rRNA_1
publication title The mitochondrial ribosome from Tetrahymena thermophila
rcsb
total genus 30
structure length 274
sequence length 274
ec nomenclature
pdb deposition date 2020-05-14
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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