6Z42A

The low resolution structure of a zinc-dependent alcohol dehydrogenase from halomonas elongata.
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
340
structure length
336
Chain Sequence
DSTMKSAVVRTFREPLVIEEVPVPRPGPGEILVKVAASGVCHTDLHAARGDWPVKPEPPFIPGHEGVGHVVAVGRGVQHVKEGDRVGVPWLYSTCGHCEHCLGGWETLCESQQNTGYSVNGEYTLAQADYVGKLPDNVGFVEIAPVLCAGVTVYKGLKMTDTRPGQWVVISGIGGLGHMAVQYARAMGLNVAAVDVDDAKLALAERLGATITVNAMQTDPARYLKQTIGGAHGALVTAVSPKAFEQALGMIRRGGTVALNGLPPGDFPLPIFDMVLNGITVRGSIVGTRLDLQEALDFAGEGKVQATVKTEKLENINTVFDQMTQGHIGRIVLDLA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Alcohol dehydrogenase, zinc-containing
publication title Novel halo-tolerant biocatalyst displaying alcohol and aldehyde dehydrogenase activity
rcsb
source organism Halomonas elongata (strain atcc 33173 / dsm 2581 / nbrc 15536 / ncimb 2198 / 1h9
total genus 79
structure length 336
sequence length 340
chains with identical sequence B, C, D
ec nomenclature ec 1.1.1.1: Alcohol dehydrogenase.
pdb deposition date 2020-05-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00107 ADH_zinc_N Zinc-binding dehydrogenase
A PF08240 ADH_N Alcohol dehydrogenase GroES-like domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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