6Z9LA

Enterococcal prga
Total Genus 316
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
316
sequence length
744
structure length
744
Chain Sequence
AITEKQQQVTEKQAIVDQKQQVADTAKKEKDAIDQSVKDQQAVVDQNKDALDQSQQAVTDQQAVVDEAKKVVDEATPSAIEKAKEQVATDTQAVDEQQKVVDQAQTDVNQQQAVVDEKAKETNAAKVQNEKDQQAVTAAKQEQAKLEELAKNAEAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSKEELKGHKGINLPPKFSADYDTKLSAEEIATLEKTALEMNKNFPTSKEDEKNKDVMWDIQHLSADQKKELSVYTTELLNDVRKKLGLSQLSVSDQSIKFAWDIAKYSDTGEYMHDVIAINKAAKENGFKEYPGMNYYENLGGGYYETENGKVSKYTLQESIRKMLVNMLFDDGRLGYSHLHSLLQDGKTALGVSLSGEKNSISPKIHIISYGKEKLEDSSQYQNGEVASMKSKEELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRAAVLEKAKTNVAEAQAIEQTSAKVLKEKQEAQKAEENTLNSLKEVLDLAKENLNQKQVALKTSTRSLSRLENAQPTYEKALNELNKAEAAVVQAQEAYENSMKSLEELKEQQAVATLAYAQAQEDLSNAKLELQQYQGVLRDLEAQQAEQRRQEALQEQVAKEQQR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Cell adhesion
molecule keywords PrgA
publication title Enterococcal PrgA Extends Far outside the Cell and Provides Surface Exclusion to Protect against Unwanted Conjugation.
pubmed doi rcsb
source organism Enterococcus faecalis
total genus 316
structure length 744
sequence length 744
ec nomenclature
pdb deposition date 2020-06-04
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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