6ZJY5

Respiratory complex i from thermus thermophilus, nad+ dataset, minor state
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
196
structure length
196
Chain Sequence
MRLERVLEEARAKGYPIEDNGLGNLWVVLPRERFKEEMAHYKAMGFNFLADIVGLDYLTYPDPRPERFAVVYELVSLPGWKDGDGSRFFVRVYVPEEDPRLPTVTDLWGSANFLEREVYDLFGIVFEGHPDLRKILTPEDLEGHPLRKDYPLGETPTLFREGRYIIPAEFRAALTGKDPGLTFYKGGSRKGYRSLW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords NADH-quinone oxidoreductase subunit 1
publication title Key role of quinone in the mechanism of respiratory complex I.
pubmed doi rcsb
total genus 22
structure length 196
sequence length 196
ec nomenclature ec 7.1.1.-:
pdb deposition date 2020-06-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
5 PF00329 Complex1_30kDa Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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