7A27AAA

Structure of soluble smha crystal form 2 of the tripartite alpha-pore forming toxin, smh, from serratia marcescens.
Total Genus 139
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
139
sequence length
364
structure length
345
Chain Sequence
b'NLTSIDLSPQTLMAMHISISSQALLNQSYSNLLLSQQLLTSQSMDPGLTVKIKAYQNQLRQQAQVFKQNTVAELIGLYTKASNFAALVNAVNALYSTEDPQVSQKGAEMVAALSDVAQHYQAAAQAVHTQLQAKREMLEPLMGNFLNVIDAIEQGLNAEAKQQAQTIAELNEAIAKNIQSIADAGFKAGEGVVQLGQSIVAAVPLGPASYMISGIQAISAGASGAQQAVNELKANYAKLAVAYRALATANALLSVAKSVQAQAQLFVDTYVLTEQRMALLPTEWGKVAEAYLTAAPIINQAGSAAEIKQAKQIISLNAEKWQLFSKSIDNAKANYAGNNILPEVL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords SmhA
molecule tags Toxin
source organism Serratia marcescens
publication title Characterisation of a tripartite alpha-pore forming toxin from Serratia marcescens
pubmed doi rcsb
total genus 139
structure length 345
sequence length 364
chains with identical sequence BBB, CCC, GGG
ec nomenclature
pdb deposition date 2020-08-16
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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