7A4DC

Crystal structure of the aph coiled-coil in complex with nanobodies nb28 and nb30
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
113
structure length
113
Chain Sequence
QLQESGGGLVQPGGSLRLSCAASGSIFSDNDMGWYRQPPGKQREWVATITYDHVTWYADSVKGRFAISRDNAKNTVYLQMNDLKPEDTAVYYCNAVPGRRGSWGQGTQVTVSS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags De novo protein
molecule keywords Nanobody Nb28
publication title A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures.
pubmed doi rcsb
source organism Lama glama
total genus 27
structure length 113
sequence length 113
chains with identical sequence D, I, J
ec nomenclature
pdb deposition date 2020-08-19
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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