7A73A

Crystal structure of the two-domain cyclophilina from anabaena sp.
Total Genus 105
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
105
sequence length
334
structure length
334
Chain Sequence
NAITDGRALLRYALPINNKPVRELQASLEDISAQLRANRRWGAVSKDLSKASRILDKPSQILTSVPEERQTQAETWINELKTGVVKVQELAQSKDKEQVLLERAKLLNLVSLIEESMVKEFPFEVPEEYNNLPQLKGRATIAIKTNKGDLTVVVDGYSAPVTAGNFVDLVKRGFYNGLEFTRSEESYVLQTGDPPGKEQGFIDPKTGKYRAIPLEILAEGDKKPTYGITLEDAGRYLDMPVLPFSSFGALAMARPETEVDGASSQVFFFLFEPELTPAGRNLLDGRYSVFGYLIEGRDILDTLKAGDKIESATVVQGLDNLVQPQSAAIEVLFQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Plant protein
molecule keywords Alr5059 protein
publication title The two-domain cyclophilin family protein anaCyp40 of Anabaena sp. regulates photosystem assembly and phycobilisome association
rcsb
source organism Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576)
total genus 105
structure length 334
sequence length 334
ec nomenclature ec 5.2.1.8: Peptidylprolyl isomerase.
pdb deposition date 2020-08-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00160 Pro_isomerase Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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