7AGX1A

Apo-state type 3 secretion system export apparatus complex from salmonella enterica typhimurium
Total Genus 71
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
219
structure length
200
Chain Sequence
GNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLSMFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYM
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein transport
molecule keywords Surface presentation of antigens protein SpaP
publication title Substrate-engaged type III secretion system structures reveal gating mechanism for unfolded protein translocation
doi rcsb
total genus 71
structure length 200
sequence length 219
chains with identical sequence 1B, 1C, 1D, 1E
ec nomenclature
pdb deposition date 2020-09-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
1A PF00813 FliP FliP family
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the pdb database (?% sequence similarity)

 
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