7BTZA

Crystal structure of trmo
Total Genus 46
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
232
structure length
212
Chain Sequence
FELMTHSVSPIGYIRSCFMEKFAIPRQPLLAPAARGTLELLPPFDQVEALEGLEQVSHVWLLFLFHQAPRLKLGVFATRATHRPNGIGQSVVRLEGFEAGRLWLSGIDLLDGTPVLDIKPYVPYADAVADARNGIADAPPPGIAVEWSEQARRQAHEHGQRLRQPVAELIEQCLAQDPRPEPGRRYGVRLWDLDVHWHYPRPDLIRVLDVAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Putative tRNA (Adenine(37)-N6)-methyltransferase
publication title Crystal structure of TrmO from Pseudomonas aeruginosa
rcsb
source organism Pseudomonas aeruginosa
total genus 46
structure length 212
sequence length 232
chains with identical sequence B
ec nomenclature
pdb deposition date 2020-04-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01980 TrmO tRNA-methyltransferase O
A PF18389 TrmO_C TrmO C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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