7C7AE

Cryo-em structure of yeast ribonuclease mrp with substrate its1
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
145
structure length
145
Chain Sequence
VRLKSRYILFEIIFPPTDTNVEESVSKADILLSHHRASPADVSIKSILQEIRRSLSLNLGDYGSAKCNSLLQLKYFSNKTSTGIIRCHREDCDLVIMALMLMSKIGDVDGLIVNPVKVSGTIKKIEQFAMRRNSKILNIIKCSQS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Rna binding protein
molecule keywords Ribonuclease MRP RNA subunit NME1
publication title Structural insight into precursor ribosomal RNA processing by ribonuclease MRP.
pubmed doi rcsb
total genus 27
structure length 145
sequence length 145
ec nomenclature ec 3.1.26.5: Ribonuclease P.
pdb deposition date 2020-05-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF01900 RNase_P_Rpp14 Rpp14/Pop5 family
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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