7CG3A

Staggered ring conformation of cthsp104 (hsp104 from chaetomium thermophilum)
Total Genus 168
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
168
sequence length
719
structure length
568
Chain Sequence
b'NLSKFCIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEGLAQRIVNADVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIILFVDEIHLLMGLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVLVKEPSITETISILRGLKEKYEVHHGVNIADAAIVAAANLAARYLTSRRLPDSAVDLIDEAAAAVRVARESMITDVVGPDQINEIVARWTGIPVTRLKTSEKEKLLHMEQALSKIVVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLFDDPKSMIRFDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTEALRRRPFSILLFDEVEKAAKEVLTVLLQLMDDGRITDGQGRVVDAKNCIVVMTSNLGAEYLSRAIDPTTRELVMNTLRNYFLPEFLNRISSIVIFNRLTRREIRKIVDLRIAEIQKRLTDNDRNVTIKVSDEAKDKLGAQGYSPVYGARPLQRLLEKEVLNRLAILILRGQIREGEVACVELVDGKVQVLPNHPD'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Heat shock protein 104
publication title Split conformation of Chaetomium thermophilum Hsp104 disaggregase.
pubmed doi rcsb
source organism Chaetomium thermophilum var. coprophilum
molecule tags Chaperone
total genus 168
structure length 568
sequence length 719
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2020-06-30
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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