The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
219
|
sequence length |
542
|
structure length |
540
|
Chain Sequence |
GIASFHPSPWGDYFLKYVPCDQVTQAKMEDEVKKVEEDVKKELRKLAKAVGKPLELLNFIDVVERLGVGYRLEQEIEDLVQAIFDNDKFGVDEFDLYHTSLWFRLLRQHGFHVSCDVFGKFKGRNGRFKDSLASDVKGILGLYEASHVRTHGDDTLDEALVFTTTHLKAVVTNQPNHPLVPQVTHALMQPYHKGMPRLESRHFIAFYEKDPYHDKTLLKFGKLDFNLVQALHKKELKDLSRWWKDLDMHAKMPFPSRDRVPEGYFWTLGPFYEPQFALCRKFFLQVFKVTSIVDDIYDAYGTIDELTAFTKAAERWDRSCLDELPEYMKVSYASLIDTFEEFERDLAPQGRSWSVKYAREEMIQMCRVYYQEAKWCHEKYSPTCDEYLEKASIVSFGYNLGTVVCFLGMGDVATKEAFEWARGNPKVVRAAGIIGRLMDDIGSHHFEQGRDHVPSAVECYIRQHGVDEVTAQRELGKRVESSWKDINEMMLKPYMMPKPLLTRILNECRIVDVIYKGEYTFSNTTMKKNISHILTDPIPI
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
molecule tags |
Biosynthetic protein
|
molecule keywords |
(-)-drimenol synthase
|
publication title |
Structural and Biochemical Studies of Drimenol Synthase from Persicaria hydropiper
rcsb |
source organism |
Persicaria hydropiper
|
total genus |
219
|
structure length |
540
|
sequence length |
542
|
chains with identical sequence |
B
|
ec nomenclature |
ec
4.2.3.194: (-)-drimenol synthase. |
pdb deposition date | 2020-07-14 |
chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
---|---|---|---|
A | PF01397 | Terpene_synth | Terpene synthase, N-terminal domain |
A | PF03936 | Terpene_synth_C | Terpene synthase family, metal binding domain |
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