7D3YC

Crystal structure of the osphr2-osspx2 complex
Total Genus 36
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
36
sequence length
123
structure length
103
Chain Sequence
RMRWTPELHERFVDAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRTARYRPELSEGNFDLTEALRLQLELQKRLHEQLEIQRSLQLRILEHHHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Dna binding protein
molecule keywords SPX domain-containing protein 2,Isoform 1 of Core histone macro-H2A.1
publication title Mechanism of SPX2 sensing inositol pyrophosphate signal to deactivate PHR2 in rice phosphate homeostasis maintenance
rcsb
source organism Oryza sativa subsp. indica
total genus 36
structure length 103
sequence length 123
chains with identical sequence D, E
ec nomenclature
pdb deposition date 2020-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00249 Myb_DNA-binding Myb-like DNA-binding domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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