7D6NA

Crystal structure of tick-borne encephalitis virus rna-dependent rna polymerase
Total Genus 205
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
205
sequence length
619
structure length
588
Chain Sequence
b'DKVKEKDVQERISALREQYGETWHMDREHPYRTWQYWGSYRTAPTGSAASLINGVVKLLSWPWNAREDVVRMAMTDTTAFGQQRVFKEKVDTKAQEPQPGTKVIMRAVNDWILERLARKSKPRMCSREEFIAKVKSNQNRWSAKEAVEDPAFWQLVDEERERHLAGRCAHCVYNMWYMWLGSRFLEFEALGFLNEDHWASRGSSGSGVEGISLNYLGWYLKGLSTLEGGLFYADDTAGWDTKVTNADLEDEEQLLRYMEGEHKQLAATIMQKAYHAKVVKVARPSRDGGCVMDVITRRDQRGSGQVVTYALNTLTNIKVQLIRMMEGEGVIEASDAHNPRLLRVERWLRDHGEERLGRMLVSGDDCVVRPVDDRFSRALYFLNDMAKTRKDIGEWEHSVGFSNWEEVPFCSHHFHELVMKDGRALIVPCRDQDELVGRARVSPCGWSVRETACLSKAYGQMWLLSYFHRRDLRTLGLAICSAVPIDWVPTGRTTWSIHASGAWMTTEDMLDVWNRVWILDNPFMHSKEKIVEWRDVPYLPKSHDMLCSSLVGRKERAEWAKNIWGAVEKVRKMIGQEKFKDYLSCMDR'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Tick-borne encephalitis virus RNA-dependent RNA polymerase
publication title Crystal structure of tick-borne encephalitis virus
rcsb
source organism Tick-borne encephalitis virus
molecule tags Transferase
total genus 205
structure length 588
sequence length 619
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature ec 3.4.21.91: Flavivirin.
pdb deposition date 2020-10-01
Image from the rcsb pdb (www.rcsb.org)
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...