7DNNA

Crystal structure of the agcarb2-c2 complex with homoorientin
Total Genus 128
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
128
sequence length
336
structure length
336
Chain Sequence
EGIAGSGIELGITLYSLTSEFAAGLYTPETLIKAVADEGLGPGVEFNIAQMLRTYPDVDDDFVKLWRDSMDRYGLTPSAVGTNLDMGRRKDRDMTPDEEYDFFAAQLRTANKLGFHRVVIRSAGKELLRRLLPLAEKYDQKLGYEIHAPQGPNDPKILQIREMYAELGSDRLGFTADFSSTMHSLSPTLFRTLTQMGLPEEHFAVMQDIWRKPLPMQERNQEFEDYLRANNFDPAQLGPFTRLAFNMHGLVPPEEWLDIMPQIFHVHAKFYDIDENGNEPAMDIPRIVRQFVKGGYRGYLSSEWEGHAFADLGESDPIDLVKKQHSLMRRAIEEAV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal binding protein
molecule keywords AP_endonuc_2 domain-containing protein
publication title Structural basis for the metabolism of xenobiotic C-glycosides by intestinal bacteria
rcsb
source organism Arthrobacter globiformis nbrc 12137
total genus 128
structure length 336
sequence length 336
chains with identical sequence P
ec nomenclature
pdb deposition date 2020-12-10
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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