7DNSA

Crystal structure of domain-swapped dimer of h5_fold-0 elsa; de novo designed protein with an asymmetric all-alpha topology
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
90
structure length
90
Chain Sequence
GEEQKEIETLVELFAEAFREAKRQKKNGTPEEWARDAVEEAARQQGRSRKDVVEALTKYAQEQGRDELLKRLGITPEIYKVIQQIRKEEG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags De novo protein
molecule keywords de novo designed protein
publication title Design of complicated all-alpha protein structures
rcsb
source organism Synthetic construct
total genus 38
structure length 90
sequence length 90
chains with identical sequence B
ec nomenclature
pdb deposition date 2020-12-10
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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