7DQ6A

Crystal structure of hitb in complex with (s)-beta-3-br-phenylalanine sulfamoyladenosine
Total Genus 131
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
520
structure length
464
Chain Sequence
RAARARESVDNLYWFMLAAANSAPDTPAFVTRGVRTLSYRELRTRVDDFAAALAELGLDVDDRVVLEANVTPDAVAMLLACSLLGLPFIPVSPETPSGRLRSILDTAEPALFAQAEDGGRADVPATVGTARFGAGGLRVERAPRARVRHRREIVGTDTAYIIFTPKGVVMSHRSVVSLYRAILEQGLITPEDRIATTSPLQFDFALFDIGLALGTGAALVPVPREELNWPRRFLAFLGDTGATQVHGVPSIWRPVLRHEPELLAGLDRVRGILFTGEDFPLPELRHLQGLLPHARIVNGYGATESMACSFTEVPRPIPSDLERLSIGFPLPGFDVSLLDEHGRPVEEIGVAGQIHLRAPSMFSGYWDDPEATARVLVSDPLDPRSGRTVLRSGDLAYRGEDGELYFAGRVDAQVVERRLLEFPGISAAVALLLHAFVVVANIVAVDDIPLTVNGKVDRADLATR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ligase
molecule keywords Putative ATP-dependent b-aminoacyl-ACP synthetase
publication title Mutational Biosynthesis of Hitachimycin Analogs Controlled by the beta-Amino Acid-Selective Adenylation Enzyme HitB.
pubmed doi rcsb
source organism Embleya scabrispora
total genus 131
structure length 464
sequence length 520
chains with identical sequence B
ec nomenclature
pdb deposition date 2020-12-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00501 AMP-binding AMP-binding enzyme
A PF13193 AMP-binding_C AMP-binding enzyme C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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