7DRQA

Crystal structure of polysaccharide lyase uly1
Total Genus 121
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
121
sequence length
481
structure length
481
Chain Sequence
b'AIKLEHEIKVTDQALFFDGVKKSVPQARTQAYIEGQKYNYAYGNAIAPHGDAIKVYKNYVFMTWYRGGILDRHVMLTRYNTLTGKSVTIEFPHQHTGFEGRWWVGETHNTIAVAISPKDETIHLLYDMHAYRENTDTGGNGDIRKDYFRYSYSLAGAASVTDNNFTLTQFVKDTSVNSEGATDYKHLTMTGIEDHGQFSRLTYPTFFTSHDGDLFLHMRQGSSHDGRVVFNKYLAEQGKWSHFKSFNVLGAGKKGEIKNWSIYGKMKYADGKIRIGFQRRFNLPDRFRAQDGMFYAYSDDPSGETQWKNYKGEAITMPLVKADEALVMRPGDLLPDATAKDQVSITGGFDWTVTENGDLHLIGQTNEWVNKKVIKKVYSHTYQKAGVGELITTTDFPPASQLYTAGENIYIIGLEQGRPFVEQAKGGTNDFTRVYYAPVGSQSFQKGIVHIHDGKLYYYLLEKGGAGDKRTTYLQIINLDI'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Uly1
molecule tags Lyase
source organism Catenovulum maritimum
publication title Crystal structure of polysaccharide lyase Uly1
rcsb
total genus 121
structure length 481
sequence length 481
chains with identical sequence B
ec nomenclature
pdb deposition date 2020-12-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF15892 BNR_4 BNR repeat-containing family member
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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