7EAJF

Echovirus3 empty expanded particle in complex with 5g3 fab
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
112
structure length
112
Chain Sequence
LQQSGAELARPWASVKISCQAFYTFNSYGMQWVKQRPGQGLEWIGTIYPGNGQTSYNQRFKGKATLTADKSPSTAYMQLISLTSEDSAGCFCAVVPTVDFDYWGQGTLVTVS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Virus
molecule keywords VP1
publication title Structural basis for neutralization of an anicteric hepatitis associated echovirus by a potent neutralizing antibody.
pubmed doi rcsb
total genus 12
structure length 112
sequence length 112
ec nomenclature
pdb deposition date 2021-03-07
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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