7EDAI

Structure of monomeric photosystem ii
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
31
structure length
31
Chain Sequence
ETLKITVYIVVTFFVLLFVFGFLSGDPARNP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Photosynthesis
molecule keywords Photosystem II protein D1
publication title Structure of monomeric photosystem II
rcsb
total genus 12
structure length 31
sequence length 31
ec nomenclature
pdb deposition date 2021-03-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF02532 PsbI Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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