7EHOA

Chitin oligosaccharide binding protein
Total Genus 147
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
406
structure length
406
Chain Sequence
DSVSLTLRHINVRDTAKNTLALLEKVVKKTEAEVPGATFKLDGVEDTVNRDVKLKAEMAAGKPPQIFNLFGGADTQNYAKAGHLLPLNDILKELGLEDKFFELREFTVDGKIYGLPEAGFVEGFYYNTKLFADAGITSAPKTWDEFTKALEALKAKNITPIALGGGSGDGWAINMLANSLFVATAGPEAQEGFAKGTTKWTDPAVLDGFKRLKDLKDKGYIDPNVLGLKYSEGQAKFYTGQAAMLFDGSWATSAILDKDKSTVKDNVGYFRFPNIGGKGDNLINGGWSNGYGFSSHLNDAEKKAVKAFIKNFYTLEIQGEALGRDNRVPSMKGVPTPAEAAPLTKAIGEAQASAKAAFPAFDALVQPKVKVTLEQSVQELLGGQLTPEKLVEKMQKVQDEANAGKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords Chitin oligosaccharide binding protein NagB2
publication title Structural characterization of two solute-binding proteins for N,N'-diacetylchitobiose/N,N',N''-triacetylchitotoriose of the gram-positive bacterium, Paenibacillus sp. str. FPU-7.
doi rcsb
source organism Paenibacillus sp. fpu-7
total genus 147
structure length 406
sequence length 406
chains with identical sequence B
ec nomenclature
pdb deposition date 2021-03-30
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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