7JI0C

Cryoem structure of streptococcus thermophilus shp pheromone receptor rgg3 in complex with shp3
Total Genus 0
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
0
sequence length
8
structure length
8
Chain Sequence
DIIIIVGG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay.
pubmed doi rcsb
source organism Streptococcus thermophilus (strain atcc baa-250 / lmg 18311)
molecule tags Dna binding protein
molecule keywords Positive transcriptional regulator MutR family
structure length 8
sequence length 8
chains with identical sequence D
ec nomenclature
pdb deposition date 2020-07-21
Image from the rcsb pdb (www.rcsb.org)
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...