7JTFE

Structure of hepatitis c virus envelope glycoprotein e2 core from genotype 6a bound to broadly neutralizing antibody rm2-01
Total Genus 18
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
180
structure length
141
Chain Sequence
b'HINRTALNCNDSLQTGFITSLFYAKCPPRPCDVVSARTVCGPVYCFTPSPVVVGTTDKLGIPTYNWGENETDVFMLESLRGCTWMNSTGFTKTCGGPWITPRCLVDYPYRLWHYPCTVNFTLHKVRMFVGGIEHRFDAACN'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords RM2-01 Fab heavy chain
publication title HCV Env immunization elicits a rapid VH1-69-like broadly neutralizing antibody response in rhesus macaques
rcsb
source organism Macaca mulatta
molecule tags Immune system/viral protein
total genus 18
structure length 141
sequence length 180
chains with identical sequence F
ec nomenclature ec 2.7.7.48: RNA-directed RNA polymerase.
pdb deposition date 2020-08-17
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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