7K23H2

Murine polyomavirus hexavalent capsomer with 8a7h5 fab, subparticle reconstruction
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
99
structure length
99
Chain Sequence
LKLSCSASGFTFSSYGMHWIRQVPGKGLDWVAYISSASDTFYADAVKERFTISRDNAKNTLYLRLNSLKSEDTAIYYCARTRYPTDHFYDWFPYWGQGT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Viral protein
molecule keywords 8A7H5 Fab light chain
publication title Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
pubmed doi rcsb
source organism Mus musculus polyomavirus 1
total genus 13
structure length 99
sequence length 99
chains with identical sequence H3, H4, H5, H6
ec nomenclature
pdb deposition date 2020-09-08
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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