7K3AG

Structure of full-length influenza ha with a head-binding antibody at ph 5.2, conformation b, fusion peptide release
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
216
structure length
202
Chain Sequence
SVLTQPPSVSGAPGQRVTISCTGSSAVHWYQQLPGTAPKLLISGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSSVFGGGTKLTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Viral protein
molecule keywords Hemagglutinin
publication title Structural intermediates in the low pH-induced transition of influenza hemagglutinin.
pubmed doi rcsb
source organism Influenza a virus (strain a/hong kong/1/1968 h3n2)
total genus 32
structure length 202
sequence length 216
chains with identical sequence I, K
ec nomenclature
pdb deposition date 2020-09-10
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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