7K5BE

Structure of outer-arm dynein bound to microtubule doublet in microtubule binding state 2 (mtbs-2)
Total Genus 104
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
104
sequence length
557
structure length
555
Chain Sequence
KEFNNPINFQDTETRYGGIQNQVVNINQYVQRNPNFIDLDNIAELSEHSVNTERVKTGDRGMSHKEGGWPGNVDPNEAQETGRFKKRIEKSFPQAVKDLKEGVEKCIYQNNQIDLLEEYFEGETSEHVVENLSSKTLMLFKDEKEICKRSVSEISWHPEGPTKVAVSYAIMRFQQMPEKMPTQAYVWDLLNPNSPEIKLMSPSAVTNISYNQKIPDQIGGGCYNGLLAVWDGRKGENPIMISPVENSHYEPVTHFHWLMSKTGSECVTTSTDGKVMWWDTRKFEAGPVEKLNIIEGLGENEEIIGGTALEYNVEAGPSKFLIGTESGSILTANKKLKKPVEITTRYGLDQGRHLGPVYSINRSNQNPKYFLSVGDWSCKIWVEDLKTPIIRTKYHGSYLSDGCWSPTRSGAFFLVRRDGWMDVWDYYYRQNEIAFSHKVSDSPLTCIKINQTGGAYHNSGKLCAIGDQDGTVTILELCDSLYTMQPKEKDIINEMFEREYRKEKNLETIKKQQELAKRQVQKDMGSQKEKWEKKKLEMIETAEASFHENLAKNPV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Motor protein
molecule keywords Dynein heavy chain, outer arm protein
publication title Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.
pubmed doi rcsb
total genus 104
structure length 555
sequence length 557
ec nomenclature
pdb deposition date 2020-09-16
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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