7KBKC

Ricin bound to vhh antibody v6e11
Total Genus 25
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
125
structure length
124
Chain Sequence
LQLAESGGGLVQAGGSLNLSCIASRRTLSTSFMAWFRQVPGKEREFVAALRSSDGRPYYGDSVKGRFTVSRDNATVYLQMNSLKPEDTAIYYCALNRGYSGTGYPSKQYEYNDWGQGTQVTVSS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords Ricin
publication title Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
pubmed doi rcsb
source organism Vicugna pacos
total genus 25
structure length 124
sequence length 125
ec nomenclature
pdb deposition date 2020-10-02
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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