7KC0E

Structure of the saccharomyces cerevisiae replicative polymerase delta in complex with a primer/template and the pcna clamp
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
256
structure length
253
Chain Sequence
MLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEYRCDHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLDIDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIITKETIKFVADGDIGSGSVIIKPFVDMEHPETSIKLEDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKSGFLQFFLAPKFND
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Replication
molecule keywords DNA (5'-D(P*AP*TP*GP*AP*CP*CP*AP*TP*GP*AP*TP*TP*AP*CP*GP*AP*
publication title Structure of eukaryotic DNA polymerase delta bound to the PCNA clamp while encircling DNA.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
total genus 43
structure length 253
sequence length 256
chains with identical sequence F, G
ec nomenclature
pdb deposition date 2020-10-04
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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