7KEKH

Structure of the free outer-arm dynein in pre-parallel state
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
91
structure length
91
Chain Sequence
SHLDKVQPVIKNSDMSVEMQKEVEEVAKKAIDYCNTDKEIATFIKDDFRSRYHGTWHCIVGRNFGSFVTFERSYYIYLYVGQLAILLFKTG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Motor protein
molecule keywords Dynein alpha heavy chain
publication title Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.
pubmed doi rcsb
total genus 22
structure length 91
sequence length 91
ec nomenclature
pdb deposition date 2020-10-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
H PF01221 Dynein_light Dynein light chain type 1
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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