7KFTC

Partial cas6-rt-cas1--cas2 complex
Total Genus 132
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
132
sequence length
634
structure length
568
Chain Sequence
b'MILPSFPDLTGLVVNLKFTARAEFSLNHEMAVDAFLRHSLNLGESYSHHLSIITPENGRLFYREGDTYRFVVIAMGNQQQTNSIWHTLINHLRKNIKLESLNDLFDGIPVSSKESLDAYTLQRAMEQGLAWHKAANLTEQPLDIQWYWQSTVRILHADHKQHKGEQRYCRDAVQLTPLLLLKRIYETLNNVATYFNHQAWLKEQAQYIEIQHPDLYWIDTPLGGMAGNFTLSLKPGIEPGLLAMLILTQMVGVGQRRTSGLGKYWLKHSLKHAHLILGLKPNRVTRSQTLLDCIIQPHIISQAIAEIEKKTNIDTLNERTLSQVQSAIGQLRKHQYQAPKLQGFTIERLLAVSPLYDRILQKAAAIVLTPGLDAIMSQASYGYRKGLSRQQVRYEIQNAYRQGYHWVYESDIEDFFDAVYRPQLINRLKSLLGNDPLWEQIESWLGQDIHIKDTIIERTPNLGLPQGSPLSPLLANFILDDFDSDLETHGFKIIRFADDFIILCKSQHEAQQAAHAVEQSLKEVKLSINVEKTHIIQLNQGFRFLGYLFRTNLPPWLANLGTKSPQPL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Cas2
molecule tags Hydrolase
source organism Thiomicrospira sp.
publication title Structural coordination between active sites of a Cas6-reverse transcriptase-Cas1-Cas2 CRISPR integrase complex
rcsb
total genus 132
structure length 568
sequence length 634
chains with identical sequence D, E
ec nomenclature
pdb deposition date 2020-10-14
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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