7KTXF

Cryo-em structure of saccharomyces cerevisiae er membrane protein complex bound to a fab in ddm detergent
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
97
structure length
97
Chain Sequence
QINATANVVDNKKRLLFVQDSSALVLGLVAGFLQIESVHGFIWFLILYNLINVIYIVWICQLQPGKFYQSPLHDIFFESFFREITGFVMAWTFGYAL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein/immune system
molecule keywords ER membrane protein complex subunit 1
publication title Structural and mechanistic basis of the EMC-dependent biogenesis of distinct transmembrane clients.
pubmed doi rcsb
source organism Homo sapiens
total genus 29
structure length 97
sequence length 97
ec nomenclature
pdb deposition date 2020-11-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
F PF07019 Rab5ip Rab5-interacting protein (Rab5ip)
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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