7L20k

Cryo-em structure of the human 39s mitoribosomal subunit in complex with rrfmt and ef-g2mt.
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
96
structure length
96
Chain Sequence
AAALARLGLRPVKQVRVQFCPFEKNVESTRTFLQTVSSEKVRSTNLNCSVIADVRHDGSEPCVDVLFGDGHRLIMRGAHLTALEMLTAFASHIRAR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ribosome
molecule keywords 16S rRNA mitochondrial
publication title Cryo-EM structure of Mammalian mitochondrial ribosome complex with mtEFG2 and mtRRF
rcsb
total genus 24
structure length 96
sequence length 96
ec nomenclature
pdb deposition date 2020-12-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
k PF10780 MRP_L53 39S ribosomal protein L53/MRP-L53
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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