7L4VA

C-terminal bzip domain of human c/ebpbeta bound to dna with consensus recognition with gt mismatch
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
66
structure length
66
Chain Sequence
MKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription/dna
molecule keywords CCAAT/enhancer-binding protein beta
publication title Preferential CEBP binding to T:G mismatches and increased C-to-T human somatic mutations.
pubmed doi rcsb
source organism Homo sapiens
total genus 30
structure length 66
sequence length 66
chains with identical sequence B
ec nomenclature
pdb deposition date 2020-12-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07716 bZIP_2 Basic region leucine zipper
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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