7L79A

Crystal structure of broadly hiv-1-neutralizing antibody vrc40.01
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
229
structure length
229
Chain Sequence
QVQLIQSGPQFKTPGASVTVSCKASGYIFTDYLIHWVRLVPGKGLEWLGRINTNAGLMYLSHKFEGRLILRRVVDWRTPSLGTVNMELRNVRSDDSAIYFCGRVVDGFNAAGPLEFWGQGSPVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Heavy chain of VRC40.01
publication title Crystal structure of broadly HIV-1-neutralizing antibody
rcsb
source organism Homo sapiens
total genus 48
structure length 229
sequence length 229
chains with identical sequence H
ec nomenclature
pdb deposition date 2020-12-27
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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