7LBMm

Structure of the human mediator-bound transcription pre-initiation complex
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
130
structure length
125
Chain Sequence
KETLLQSYNKRLKDDIKSIMDNFTEIIKTETQVSRATQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEECDRKLITLRDEISIDLYELEEEYYSSSSS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/dna
molecule keywords Isoform 2 of Mediator of RNA polymerase II transcription sub
publication title Structure of the human Mediator-bound transcription preinitiation complex.
pubmed doi rcsb
source organism Homo sapiens
total genus 53
structure length 125
sequence length 130
ec nomenclature
pdb deposition date 2021-01-08
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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