7LDAA

Crystal structure of a ribose-5-phosphate isomerase from stenotrophomonas maltophilia k279a
Total Genus 80
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
80
sequence length
215
structure length
215
Chain Sequence
MSEAKRLAAEKAIEYVEDGMIVGVGTGSTVAYFIDALARIQHRIKGAVSSSEQSTARLKQHGIEVIELNHSGNLSLYVDGADECDANKCLIKGGGAALTREKIIAEASERFICIIDPSKQVPVLGRFPLPVEVIPMARSLVARQIRDMTGGQPTWREGVVTDNGNQILDIHNLQITDPEKLERELNQLPGVVCVGLFARRRADVVIVGGEPPVVL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Isomerase
molecule keywords Ribose-5-phosphate isomerase A
publication title Crystal structure of a ribose-5-phosphate isomerase from Stenotrophomonas maltophilia K279a
rcsb
source organism Stenotrophomonas maltophilia (strain k279a)
total genus 80
structure length 215
sequence length 215
chains with identical sequence B
ec nomenclature ec 5.3.1.6: Ribose-5-phosphate isomerase.
pdb deposition date 2021-01-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF06026 Rib_5-P_isom_A Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
Image from the rcsb pdb (www.rcsb.org)
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...