7LLKB

Cryo-em structure of q23.17_ds-sosip in complex with glycan276-dependent broadly neutralizing antibody 179nc75 fab
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
144
structure length
126
Chain Sequence
GFLGAAGSTMGAASNTLTVQARQLLSGIKLTVWGIKQLQARVLAVERYLEVQQLLGIWGCSGKLICCTNVPWNSSWSNKSLDEIWNNMTWLQWDKEINNYTQLIYRLIEESQFQQEINEVELLALD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Immune system/viral protein
molecule keywords Envelope glycoprotein gp120
publication title Structural Basis of Glycan276-Dependent Recognition of HIV-1 Envelope by Broadly Neutralizing Antibodies
rcsb
source organism Human immunodeficiency virus 1
total genus 39
structure length 126
sequence length 144
chains with identical sequence F, J
ec nomenclature
pdb deposition date 2021-02-04
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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