7LX0A

Quantitative assessment of chlorophyll types in cryo-em maps of photosystem i acclimated to far-red light
Total Genus 249
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
249
sequence length
779
structure length
751
Chain Sequence
EVRVVVDNDPVPTSFQKWSQPGHFDRTLAKGAKTTTWIWNLHANAHDFDTHTSDLEDISRKIFAAHFGHLAVVFIWLSGMYFHGARFSNFEAWMANPTGIKPSAQVVWPIFGQEILNGDMGGGFHGIQITSGLFQMWRAAGFTNTFQLYCTAIGGLVMAALMLFAGWFHYHKRAPKLEWFQNTQSMLNHHLAGLLGLGSLGWTGHLIHVSLPTNKLLDTGVALKDIPLPHEFILNPSLMNKLYPHADWGFVKGVVPFFTLQWGHFTDFLTFKGGLNPVTGGLWLTDVAHHHLAIAVMFIIAGHMYRTNWGIGHSIKEMLDDARTPNMLPFLSFIGPVGHKGLFEVLTTSWHAQLSINLAMLGSLSIIIAHHMYAMPPYPYLATDYGTVVSLFTHHVWIGGFLIVGGAAHAAIYMVRDYDPEQNFNNVLDRVLRHRDAIISHLAWVCQFLGFHSFAMYCHNDTMRAFGRPQDMFSDTGIQLQPVFAQWLQHIHTMTIAAPNLHDPVSYAFGGGVVAVGGKVAMMPITLGTADFLIHHIHAFTIHVTVLVLLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSLSMVIFHFFWKMQSDVWGTVGADGVVTHITGGNFATSSITNNGWLRDFLWAQSTQVITSYNTSLSAYGLMFLGGHFIFGFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIIHGRAVGVAHYLLGGIVTTWAFFLARMTAFG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Photosynthesis
molecule keywords Photosystem I P700 chlorophyll a apoprotein A1
publication title Quantitative assessment of chlorophyll types in cryo-EM maps of photosystem I acclimated to far-red light
doi rcsb
total genus 249
structure length 751
sequence length 779
chains with identical sequence G, a
ec nomenclature ec 1.97.1.12: Photosystem I.
pdb deposition date 2021-03-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00223 PsaA_PsaB Photosystem I psaA/psaB protein
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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