7MFGF

Cryo-em structure of the vrc310 clinical trial, vaccine-elicited, human antibody 310-030-1d06 fab in complex with an h1 nc99 ha trimer
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
108
structure length
108
Chain Sequence
EIVLTQSPGTLSLFSGERATLSCRASQSVSSSSLAWYQQKHGQGPRLIMYGASSRATGIPDRFSGSGFGTDFTITISRLEPEDFAVYYCQQYGSSSGTFGQGTKLEMK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Viral protein/immune system
molecule keywords Hemagglutinin HA1 chain
publication title A single residue unique to influenza H2 hemagglutinin enhances the breadth of the B cell response elicited by H2 vaccination
rcsb
source organism Influenza a virus
total genus 12
structure length 108
sequence length 108
chains with identical sequence K, L
ec nomenclature
pdb deposition date 2021-04-09
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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