7MUWAN

Reconstruction of the legionella pneumophila dot/icm t4ss 3dva map 4
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
78
structure length
78
Chain Sequence
DGCCSKMGGINYCDSSAGRLVCNNGFYSTCYCTRHAVMDLQFLMGCCLWHGGVYPQLNSSGLVVCNDGYVSEECSLQK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Translocase
molecule keywords IcmE protein
publication title Cryo-EM reconstructions of the Legionella pneumophila Dot/Icm T4SS reveal new components and provide insight into symmetry mismatch between subcomplexes
rcsb
total genus 7
structure length 78
sequence length 78
chains with identical sequence BN, CN, DN, EN, FN, GN, HN, IN, JN, KN, LN, MN
ec nomenclature
pdb deposition date 2021-05-14
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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