7NMMI

Complex of rice blast (magnaporthe oryzae) effector protein apikl2f with the host target shma94 from setaria italica
Total Genus 14
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
91
structure length
91
Chain Sequence
NEYIDAKKHGIDLSRERAPNFVDHPGIPPSDCFWFLYKNYVRQNAGVCQSDWSFDMKIGQYWVTIHTDEGCRLSGIIPAGWLILGMKRPGF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Plant protein
molecule keywords sHMAx
publication title A single amino acid polymorphism in a conserved effector of the multihost blast fungus pathogen expands host-target binding spectrum
rcsb
source organism Setaria italica
total genus 14
structure length 91
sequence length 91
chains with identical sequence J, K, L, M, N, O, P
ec nomenclature
pdb deposition date 2021-02-23
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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